Use our interactive visualizations to explore and gain novel insights from pre-analyzed genomic sequencing data from the Pediatric Cancer Genome Project and other studies. We have developed a unique data browser that provides easy navigation through experimental data and can also be used as a genome browser for both coding and non-coding regions. View help guides » 

PCGP Somatic and Germline Mutations

Germline SNVs and indels detected in the Pediatric Cancer Genome Project visualized in the ProteinPaint genome browser. Genome build GRCh38.

 

PeCan

Interactive visualizations featuring pediatric cancer data curated by St. Jude Children’s Research Hospital.

 

ProteinPaint

Genomic visualization engine and data browser developed at St. Jude Children’s Research Hospital.

 

Pediatric Pan-Cancer Transcriptome Summary

Summary visualization accompanying “Pan-cancer genome and transcriptome analyses of 1,699 paediatric leukaemias and solid tumours”, Ma et al. (2018)

PMID: 29489755

 

Orthotopic Patient-Derived Xenografts of Pediatric Solid Tumors

Summary visualization accompanying "Orthotopic Patient-Derived Xenografts of Pediatric Solid Tumors", Stewart et al. (2017)

PMID: 28854174

 

T-ALL Genomic Summary

Summary visualization accompanying "The genomic landscape of pediatric and young adult T-lineage acute lymphoblastic leukemia", Liu et al. (2017)

PMID: 28671688

 

Medulloblastoma Genomic Summary

Summary visualization accompanying "The whole-genome landscape of medulloblastoma subtypes", Nortcott et al. (2017)

PMID: 28726821

 

Epigenetic Changes in the Developing Retina

Summary visualization accompanying "The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis", Aldiri et al. (2017)

PMID: 28472656

 

DUX4/ERG ALL Genomic Summary

Summary visualization accompanying "Deregulation of DUX4 and ERG in acute lymphoblastic leukemia" Zhang et al. (2016)

PMID: 27776115

 

Core-binding factor AML Genomic Summary

Summary visualization accompanying "The genomic landscape of core-binding factor acute myeloid leukemias" Faber et al. (2016)

PMID: 27798625